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  5. Ppi_g25213

Ppi_g25213


Description : component *(eS12) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001020_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g25213
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00079060 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Adi_g129311 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Aob_g36028 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0161.g054093 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ceric.37G058700.1 Ceric.37G058700 component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ceric.37G058900.1 Ceric.37G058900 component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020903.34 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Cre04.g214503 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g05975 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g27954 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01034219001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os07g05580.1 LOC_Os07g05580 component RPS12 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os07g12650.1 LOC_Os07g12650 component RPS12 of SSU proteome 0.03 OrthoFinder output from all 47 species
Len_g05775 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g20839 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
MA_16920g0010 No alias component RPS12 of SSU proteome 0.04 OrthoFinder output from all 47 species
Mp7g11470.1 No alias component RPS12 of SSU proteome 0.04 OrthoFinder output from all 47 species
Msp_g03347 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Pir_g41112 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c17_3630V3.1 Pp3c17_3630 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.02 OrthoFinder output from all 47 species
Ppi_g23142 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g04208 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g06992 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g09099 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Smo441919 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Solyc01g103800.3.1 Solyc01g103800 component RPS12 of SSU proteome 0.02 OrthoFinder output from all 47 species
Solyc12g042650.2.1 Solyc12g042650 component RPS12 of SSU proteome 0.04 OrthoFinder output from all 47 species
Spa_g05809 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Spa_g17185 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Spa_g22036 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Tin_g35882 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Tin_g39177 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e009380_P001 Zm00001e009380 component RPS12 of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007160 cell-matrix adhesion IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0031589 cell-substrate adhesion IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 22 115
No external refs found!