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  5. Ppi_g25149

Ppi_g25149 (NPQ4, PSBS)


Aliases : NPQ4, PSBS

Description : not classified & original description: none


Gene families : OG0002938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002938_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g25149
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Als_g57804 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Aob_g25558 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.04 OrthoFinder output from all 47 species
Aop_g15210 NPQ4, PSBS not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g15673 NPQ4, PSBS not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21918 NPQ4, PSBS not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g78984 NPQ4, PSBS not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.36G021200.1 NPQ4, PSBS,... non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Cre01.g016750 NPQ4, PSBS Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder output from all 47 species
Dcu_g00800 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.02 OrthoFinder output from all 47 species
Dde_g06083 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Lfl_g15847 NPQ4, PSBS not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32714 NPQ4, PSBS not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ppi_g02820 NPQ4, PSBS not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g16538 NPQ4, PSBS not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g17059 NPQ4, PSBS not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17060 NPQ4, PSBS not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g11981 No alias non-photochemical quenching PsbS protein & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!