Ppi_g25146 (RPL23AB)

Aliases : RPL23AB

Description : component *(uL23) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0001401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001401_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g25146

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00069970	RPL23AB,...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
AMTR_s00029p00132520	RPL23AB,...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
AT2G39460	RPL23A, RPL23AA, ATRPL23A	ribosomal protein L23AA	0.03	OrthoFinder output from all 47 species
AT3G55280	RPL23AB	ribosomal protein L23AB	0.02	OrthoFinder output from all 47 species
Aop_g19896	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000037.39	RPL23AB	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Cre06.g282500	RPL23A, RPL23AA, ATRPL23A	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
MA_10430928g0010	RPL23AB	component RPL23a of LSU proteome component	0.02	OrthoFinder output from all 47 species
Mp2g00570.1	RPL23AB	component RPL23a of LSU proteome component	0.03	OrthoFinder output from all 47 species
Msp_g10039	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pp3c12_19360V3.1	RPL23AB, Pp3c12_19360	ribosomal protein L23AB	0.01	OrthoFinder output from all 47 species
Pp3c3_21160V3.1	RPL23AB, Pp3c3_21160	ribosomal protein L23AB	0.01	OrthoFinder output from all 47 species
Pp3c4_8620V3.1	RPL23AB, Pp3c4_8620	ribosomal protein L23AB	0.01	OrthoFinder output from all 47 species
Ppi_g38576	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Sam_g06116	No alias	component *(uL23) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Solyc10g086330.2.1	RPL23AB, Solyc10g086330	component RPL23a of LSU proteome component	0.02	OrthoFinder output from all 47 species
Spa_g10914	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Spa_g25289	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Spa_g45231	RPL23AB	component *(uL23) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Zm00001e041164_P001	RPL23A, RPL23AA,...	component RPL23a of LSU proteome component	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0004779	sulfate adenylyltransferase activity	IEP	HCCA
MF	GO:0004781	sulfate adenylyltransferase (ATP) activity	IEP	HCCA
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007264	small GTPase mediated signal transduction	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
MF	GO:0051920	peroxiredoxin activity	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
MF	GO:0070566	adenylyltransferase activity	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013025	Ribosomal_L25/23	269	333
IPR005633	Ribosomal_L23/L25_N	211	260

External Links

No external refs found!

Ppi_g25146 (RPL23AB)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation