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  5. Ppi_g24422

Ppi_g24422


Description : not classified & original description: none


Gene families : OG0000540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000540_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g24422
Cluster HCCA: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00143350 MKS1,... No description available 0.02 OrthoFinder output from all 47 species
AT1G68450 No alias VQ motif-containing protein 0.03 OrthoFinder output from all 47 species
Ala_g34104 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g00611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23289 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g04017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09531.t1 MKS1, Aspi01Gene09531 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G042800.1 Ceric.29G042800 not classified & original description: pacid=50624678... 0.04 OrthoFinder output from all 47 species
Dac_g23425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17650 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_37589 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g01260.1 MKS1, LOC_Os08g01260 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_370498g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_63904g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pnu_g25337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37259 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g060470.1.1 MKS1, Solyc06g060470 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 36 63
No external refs found!