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  5. Ppi_g24413

Ppi_g24413


Description : component *(eS30) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0002477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002477_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g24413

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0068.g036442 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cba_g69506 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Cba_g73257 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cre16.g666301 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
Dcu_g30830 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01016902001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Gb_16784 No alias component RPS30 of SSU proteome 0.03 OrthoFinder output from all 47 species
Gb_23464 No alias component RPS30 of SSU proteome 0.03 OrthoFinder output from all 47 species
Len_g35390 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g13419 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
MA_10432727g0010 No alias component RPS30 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp2g24290.1 No alias component RPS30 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp8g09080.1 No alias component RPS30 of SSU proteome 0.04 OrthoFinder output from all 47 species
Nbi_g43255 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g31576 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006846 Ribosomal_S30 75 111
IPR000626 Ubiquitin-like_dom 3 70
No external refs found!