Description : component *(eS8) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0000906 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000906_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g23733 | |
Cluster | HCCA: Cluster_119 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00109p00031400 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g34365 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
Ala_g38098 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Als_g62935 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g07667 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020610.79 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | OrthoFinder output from all 47 species | |
Cre06.g272800 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g03069 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g26233 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ehy_g18830 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01037763001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g28810.1 | LOC_Os02g28810 | 40S ribosomal protein S8 OS=Oryza sativa subsp. japonica... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g28180.1 | LOC_Os04g28180 | component RPS8 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Mp2g16300.1 | No alias | component RPS8 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Pp3c13_20020V3.1 | Pp3c13_20020 | Ribosomal protein S8e family protein | 0.02 | OrthoFinder output from all 47 species | |
Pp3c19_6490V3.1 | Pp3c19_6490 | Ribosomal protein S8e family protein | 0.02 | OrthoFinder output from all 47 species | |
Sam_g15855 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g007570.3.1 | Solyc06g007570 | component RPS8 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g083180.4.1 | Solyc06g083180 | component RPS8 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g065170.3.1 | Solyc07g065170 | component RPS8 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Solyc09g057650.3.1 | Solyc09g057650 | component RPS8 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
Solyc10g006070.3.1 | Solyc10g006070 | component RPS8 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Spa_g25236 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g09569 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e004092_P002 | Zm00001e004092 | component RPS8 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e024995_P001 | Zm00001e024995 | component RPS8 of SSU proteome | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022309 | Ribosomal_S8e/biogenesis_NSA2 | 5 | 185 |
No external refs found! |