Ppi_g23657


Description : component *(eL22) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000309 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g23657

Target Alias Description ECC score Gene Family Method Actions
Als_g38436 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Aop_g10541 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Cba_g49596 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ceric.08G045600.1 Ceric.08G045600 component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ceric.26G014800.1 Ceric.26G014800 component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Dac_g04863 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Dcu_g50261 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
GSVIVT01031130001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 39 species
Gb_08874 No alias component RPL22 of LSU proteome component 0.01 OrthoFinder output from all 39 species
Gb_36164 No alias component RPL22 of LSU proteome component 0.01 OrthoFinder output from all 39 species
Len_g02481 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Msp_g03306 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Nbi_g07171 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Pp3c1_120V3.1 Pp3c1_120 Ribosomal L22e protein family 0.01 OrthoFinder output from all 39 species
Pp3c2_28500V3.1 Pp3c2_28500 Ribosomal L22e protein family 0.01 OrthoFinder output from all 39 species
Pp3c2_28510V3.1 Pp3c2_28510 Ribosomal L22e protein family 0.01 OrthoFinder output from all 39 species
Pp3c7_27030V3.1 Pp3c7_27030 Ribosomal L22e protein family 0.02 OrthoFinder output from all 39 species
Ppi_g41538 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Spa_g22846 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Spa_g28148 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Tin_g36488 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 59 168
No external refs found!