Description : component *(eL22) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000996 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000996_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00069p00189250 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
AT3G05560 | No alias | Ribosomal L22e protein family | 0.03 | OrthoFinder output from all 47 species | |
Als_g03478 | No alias | component *(eL22) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.26G014800.1 | Ceric.26G014800 | component *(eL22) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001206.7 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
Cre07.g357850 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01028021001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01031130001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01035141001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
Mp4g02920.1 | No alias | component RPL22 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
Ore_g24673 | No alias | component *(eL22) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Pp3c1_120V3.1 | Pp3c1_120 | Ribosomal L22e protein family | 0.03 | OrthoFinder output from all 47 species | |
Pp3c2_28500V3.1 | Pp3c2_28500 | Ribosomal L22e protein family | 0.03 | OrthoFinder output from all 47 species | |
Pp3c2_28510V3.1 | Pp3c2_28510 | Ribosomal L22e protein family | 0.03 | OrthoFinder output from all 47 species | |
Pp3c7_27030V3.1 | Pp3c7_27030 | Ribosomal L22e protein family | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e035835_P001 | Zm00001e035835 | component RPL22 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000702 | oxidized base lesion DNA N-glycosylase activity | IEP | HCCA |
MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
MF | GO:0008534 | oxidized purine nucleobase lesion DNA N-glycosylase activity | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009522 | photosystem I | IEP | HCCA |
CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
MF | GO:0019104 | DNA N-glycosylase activity | IEP | HCCA |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002671 | Ribosomal_L22e | 59 | 168 |
No external refs found! |