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  5. Ppi_g23134

Ppi_g23134


Description : component *(uL22) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001495 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001495_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g23134
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00211990 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AMTR_s00013p00223470 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT1G27400 No alias Ribosomal protein L22p/L17e family protein 0.02 OrthoFinder output from all 47 species
Aop_g07938 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g49076 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g70095 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001215.8 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dcu_g32685 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01010450001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os08g41810.1 LOC_Os08g41810 component RPL17 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os09g08430.1 LOC_Os09g08430 component RPL17 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Lfl_g31086 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
MA_10430182g0010 No alias component RPL17 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp1g10230.1 No alias component RPL17 of LSU proteome component 0.01 OrthoFinder output from all 47 species
Ore_g07962 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pir_g39286 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g07930 No alias component *(uL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e003661_P001 Zm00001e003661 component RPL17 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 21 155
No external refs found!