Ppi_g22056 (REME1)


Aliases : REME1

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g22056
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00232p00000850 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g21090... 0.03 OrthoFinder output from all 47 species
AT1G17630 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G11460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g11836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17028 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g34224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19869 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09923 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g44924 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.26G035200.1 Ceric.26G035200 not classified & original description: pacid=50599772... 0.03 OrthoFinder output from all 47 species
Dac_g18775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08450 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24260 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g39554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g35317 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g28033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g01790.1 No alias ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Msp_g12146 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47021 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo76175 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Smo91949 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc04g051480.1.1 OTP84, Solyc04g051480 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Solyc08g076150.4.1 Solyc08g076150 Pentatricopeptide repeat-containing protein At1g31920... 0.02 OrthoFinder output from all 47 species
Solyc09g007040.1.1 Solyc09g007040 Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
Spa_g44783 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04171 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05165 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06077 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 302 323
IPR002885 Pentatricopeptide_repeat 98 120
IPR002885 Pentatricopeptide_repeat 200 223
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 226 272
No external refs found!