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  5. Ppi_g21958

Ppi_g21958 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0012308 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012308_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g21958

Target Alias Description ECC score Gene Family Method Actions
Adi_g098000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 178 225
IPR002885 Pentatricopeptide_repeat 76 122
IPR002885 Pentatricopeptide_repeat 11 41
No external refs found!