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  5. Ppi_g21071

Ppi_g21071 (UBQ11)


Aliases : UBQ11

Description : not classified & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g21071

Target Alias Description ECC score Gene Family Method Actions
AT2G35635 UBQ7, RUB2 ubiquitin 7 0.03 OrthoFinder output from all 47 species
Als_g41937 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Als_g43064 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Als_g49627 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54450.t1 Aspi01Gene54450 component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g45522 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.50 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Cre06.g273600 UBQ6 Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g38726 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01022543001 No alias Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum 0.03 OrthoFinder output from all 47 species
GSVIVT01038617001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g16121 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_529552g0010 UBQ6 component RPS27a of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp6g16040.1 No alias Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare... 0.01 OrthoFinder output from all 47 species
Pnu_g32597 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Pp3c10_25270V3.1 Pp3c10_25270 ubiquitin extension protein 1 0.03 OrthoFinder output from all 47 species
Pp3c12_5640V3.1 UBQ6, Pp3c12_5640 ubiquitin 6 0.01 OrthoFinder output from all 47 species
Pp3c20_23170V3.1 Pp3c20_23170 ubiquitin extension protein 1 0.02 OrthoFinder output from all 47 species
Pp3c24_430V3.1 Pp3c24_430 ubiquitin extension protein 1 0.01 OrthoFinder output from all 47 species
Pp3c4_19000V3.1 UBQ6, Pp3c4_19000 ubiquitin 6 0.01 OrthoFinder output from all 47 species
Pp3c8_14230V3.1 UBQ6, Pp3c8_14230 ubiquitin 6 0.01 OrthoFinder output from all 47 species
Ppi_g04808 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Ppi_g10452 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Ppi_g22530 UBQ6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40236 UBQ11 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g07360 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Smo111605 UBQ6 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Solyc08g083120.3.1 Solyc08g083120 component RPL40 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Solyc12g099025.1.1 UBQ6, Solyc12g099025 component RPS27a of SSU proteome 0.02 OrthoFinder output from all 47 species
Zm00001e000962_P001 Zm00001e000962 component RPL40 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e026237_P001 UBQ6, Zm00001e026237 component RPS27a of SSU proteome 0.05 OrthoFinder output from all 47 species
Zm00001e028916_P001 UBQ6, Zm00001e028916 component RPS27a of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 69 102
IPR000626 Ubiquitin-like_dom 1 64
No external refs found!