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  5. LOC_Os11g12650.1

LOC_Os11g12650.1


Description : PHD finger transcription factor


Gene families : OG_01_0000911 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000911_tree ,
OG_02_0000834 (LandPlants) Phylogenetic Tree(s): OG_02_0000834_tree ,
OG_03_0005496 (SeedPlants) Phylogenetic Tree(s): OG_03_0005496_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g12650.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00124180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 Archaeplastida
AT2G07714 No alias transcription factor-related 0.03 Archaeplastida
ATMG00550 ORF160 BEST Arabidopsis thaliana protein match is:... 0.02 Archaeplastida
AMTR_s00099p00124180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 LandPlants
AMTR_s00138p00035380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.01 LandPlants
MA_115384g0010 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.01 LandPlants
Zm00001e012165_P001 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.01 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 628 673
No external refs found!