Description : component *(uL6) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0001493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001493_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g20331 | |
Cluster | HCCA: Cluster_149 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G33140 | PGY2 | Ribosomal protein L6 family | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001532.12 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.01 | OrthoFinder output from all 47 species | |
Cre12.g494050 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01016795001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c10_8500V3.1 | Pp3c10_8500 | Ribosomal protein L6 family | 0.01 | OrthoFinder output from all 47 species | |
Pp3c16_20070V3.1 | Pp3c16_20070 | Ribosomal protein L6 family | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g073310.3.1 | Solyc06g073310 | component RPL9 of LSU proteome component | 0.01 | OrthoFinder output from all 47 species | |
Solyc08g014550.3.1 | Solyc08g014550 | component RPL9 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e029810_P003 | Zm00001e029810 | component RPL9 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
MF | GO:0019843 | rRNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR020040 | Ribosomal_L6_a/b-dom | 20 | 93 |
No external refs found! |