Ppi_g20276

Description : component *(uL14) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0001634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001634_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g20276

Target	Alias	Description	ECC score	Gene Family Method
AT2G33370	No alias	Ribosomal protein L14p/L23e family protein	0.03	OrthoFinder output from all 47 species
Cre04.g211800	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Dac_g34723	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
LOC_Os02g56960.1	LOC_Os02g56960	component RPL23 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Len_g18420	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
MA_10432200g0010	No alias	component RPL23 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Mp5g05580.1	No alias	component RPL23 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Nbi_g20041	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Pir_g01755	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015442	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016759	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g11546	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Sam_g47118	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Tin_g03689	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Zm00001e000323_P001	Zm00001e000323	component RPL23 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Zm00001e023614_P001	Zm00001e023614	component RPL23 of LSU proteome component	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
MF	GO:0008430	selenium binding	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000218	Ribosomal_L14P	58	176

External Links

No external refs found!

Ppi_g20276

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation