Ppi_g20088


Description : not classified & original description: none


Gene families : OG0002235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g20088

Target Alias Description ECC score Gene Family Method Actions
AT2G21180 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT2G21185 No alias unknown protein; Has 9 Blast hits to 9 proteins in 4... 0.02 OrthoFinder output from all 47 species
Als_g27424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47615.t1 Aspi01Gene47615 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69114.t1 Aspi01Gene69114 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g53510.1 LOC_Os02g53510 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g47660.1 LOC_Os07g47660 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g03072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015345 No alias not classified & original description: CDS=1-375 0.03 OrthoFinder output from all 47 species
Solyc03g123380.1.1 Solyc03g123380 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g099500.2.1 Solyc12g099500 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e001624_P001 Zm00001e001624 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e016013_P001 Zm00001e016013 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!