Zm00001d028325 (GRMZM2G065635)

Aliases : GRMZM2G065635

Description : hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4 Encodes a 22&#945 hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate. DWARF 4 (DWF4)

Gene families : OG_01_0000009 (Gene family) Phylogenetic Tree(s): OG0000009_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d028325
Cluster HCCA cluster: Cluster_339

Target Alias Description ECC score Gene Family Method Actions
AT1G05160 ATKAO1, CYP88A3, KAO1 cytochrome P450, family 88, subfamily A, polypeptide 3 0.02 Gene family
MA_10427376g0010 No alias 26.10 misc.cytochrome P450 Cytochrome P450 superfamily protein 0.02 Gene family
Smo98891 PACid_15416813 26.10 misc.cytochrome P450 Encodes a protein with ABA... 0.03 Gene family
Solyc05g021390.3.1 Solyc05g021390.3 26.10 misc.cytochrome P450 member of CYP716A "cytochrome... 0.02 Gene family
Zm00001d003349 GRMZM2G107199 hormone... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan
MF GO:0020037 heme binding IEA InterProScan
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001128 Cyt_P450 51 329
IPR001128 Cyt_P450 330 437
No external refs found!