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  5. Ppi_g19455

Ppi_g19455 (LSP, LSP1,...)


Aliases : LSP, LSP1, EIF(ISO)4E, EIF4E2, eIFiso4E

Description : not classified & original description: none


Gene families : OG0001969 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001969_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g19455

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0368.g067043 EIF4E, CUM1,... not classified & original description: CDS=117-755 0.03 OrthoFinder output from all 47 species
Ceric.19G043700.1 EIF4E, CUM1,... component *(eIF-iso4E) of eIF-iso4F unwinding complex &... 0.04 OrthoFinder output from all 47 species
Pp3c11_1600V3.1 EIF4E, CUM1,... eukaryotic translation initiation factor 4E 0.02 OrthoFinder output from all 47 species
Solyc09g090580.3.1 LSP, LSP1,... component eIF-iso4E of eIF-iso4F unwinding complex 0.03 OrthoFinder output from all 47 species
Spa_g52532 EIF4E, CUM1,... component *(eIF4E) of eIF4F mRNA unwinding complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001040 TIF_eIF_4E 32 110
No external refs found!