Ppi_g18894


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g18894

Target Alias Description ECC score Gene Family Method Actions
Ala_g02562 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g04690 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g05729 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g06708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11813 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g15632 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18486 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g20301 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23943 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24243 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07062 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g07190 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07485 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18203 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19037 MEF22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19221 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54918 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04899 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05723 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10554 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17251 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g58159 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010264 No alias not classified & original description: CDS=1-2337 0.05 OrthoFinder output from all 47 species
Azfi_s0063.g035389 No alias not classified & original description: CDS=1-2073 0.05 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.06 OrthoFinder output from all 47 species
Azfi_s0242.g059819 No alias not classified & original description: CDS=1-2853 0.05 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.07 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.06 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.07 OrthoFinder output from all 47 species
Azfi_s0551.g076611 No alias not classified & original description: CDS=1-2037 0.05 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.07 OrthoFinder output from all 47 species
Azfi_s2487.g111794 No alias not classified & original description: CDS=200-2266 0.05 OrthoFinder output from all 47 species
Cba_g05819 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07456 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g10259 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20804 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29369 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67232 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74875 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G072000.1 Ceric.02G072000 not classified & original description: pacid=50584704... 0.04 OrthoFinder output from all 47 species
Ceric.08G045700.1 Ceric.08G045700 not classified & original description: pacid=50638513... 0.04 OrthoFinder output from all 47 species
Ceric.11G019200.1 Ceric.11G019200 not classified & original description: pacid=50596467... 0.04 OrthoFinder output from all 47 species
Ceric.13G012100.1 VAC1, ECB2,... not classified & original description: pacid=50635600... 0.04 OrthoFinder output from all 47 species
Ceric.15G051000.1 Ceric.15G051000 not classified & original description: pacid=50640878... 0.05 OrthoFinder output from all 47 species
Ceric.21G027500.1 Ceric.21G027500 not classified & original description: pacid=50603039... 0.05 OrthoFinder output from all 47 species
Ceric.21G089400.1 Ceric.21G089400 not classified & original description: pacid=50603367... 0.04 OrthoFinder output from all 47 species
Ceric.23G026100.1 Ceric.23G026100 not classified & original description: pacid=50611257... 0.04 OrthoFinder output from all 47 species
Ceric.25G039100.1 Ceric.25G039100 not classified & original description: pacid=50593222... 0.04 OrthoFinder output from all 47 species
Ceric.26G030400.1 Ceric.26G030400 not classified & original description: pacid=50599909... 0.05 OrthoFinder output from all 47 species
Ceric.27G014200.1 Ceric.27G014200 not classified & original description: pacid=50605189... 0.04 OrthoFinder output from all 47 species
Ceric.32G031800.1 Ceric.32G031800 not classified & original description: pacid=50597829... 0.04 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.06 OrthoFinder output from all 47 species
Dac_g27795 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g33753 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26582 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g36063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48080 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13073 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14783 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g01227 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g01675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14118 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26750 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g31613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g36692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38703 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g10135 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g11632 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13837 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g17066 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g21288 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22932 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23334 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g25475 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28692 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g39215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g39332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58422 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63291 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g10292 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g15493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17382 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g17674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55632 No alias cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003102 CRR22 not classified & original description: CDS=1-2616 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005758 No alias not classified & original description: CDS=1-2499 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005759 No alias not classified & original description: CDS=1-3063 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009977 No alias not classified & original description: CDS=1-2472 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020807 No alias not classified & original description: CDS=1-3252 0.04 OrthoFinder output from all 47 species
Spa_g01164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06738 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16921 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18788 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46288 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54985 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56966 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g21953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g46161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 318 365
IPR002885 Pentatricopeptide_repeat 783 830
IPR002885 Pentatricopeptide_repeat 567 606
IPR002885 Pentatricopeptide_repeat 100 147
IPR002885 Pentatricopeptide_repeat 685 712
IPR002885 Pentatricopeptide_repeat 203 233
IPR002885 Pentatricopeptide_repeat 292 312
No external refs found!