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  5. Ppi_g18876

Ppi_g18876


Description : not classified & original description: none


Gene families : OG0019551 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0019551_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g18876
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Len_g15355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 185 233
IPR002885 Pentatricopeptide_repeat 489 536
IPR002885 Pentatricopeptide_repeat 85 131
IPR002885 Pentatricopeptide_repeat 286 333
IPR002885 Pentatricopeptide_repeat 612 673
IPR002885 Pentatricopeptide_repeat 701 724
IPR002885 Pentatricopeptide_repeat 729 757
IPR002885 Pentatricopeptide_repeat 261 283
IPR002885 Pentatricopeptide_repeat 463 487
IPR002885 Pentatricopeptide_repeat 362 383
IPR002885 Pentatricopeptide_repeat 390 420
No external refs found!