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  5. Ppi_g18838

Ppi_g18838 (EMB975)


Aliases : EMB975

Description : not classified & original description: none


Gene families : OG0008849 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008849_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g18838

Target Alias Description ECC score Gene Family Method Actions
Adi_g075702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g56468 ATGCN4, GCN4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0331.g065404 EMB975 not classified & original description: CDS=1-1374 0.03 OrthoFinder output from all 47 species
MA_10281691g0010 EMB975 Pentatricopeptide repeat-containing protein At2g01860... 0.02 OrthoFinder output from all 47 species
Nbi_g17087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013862 No alias not classified & original description: CDS=217-1683 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 406 462
No external refs found!