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  5. Ppi_g18743

Ppi_g18743 (CDC23, APC8)


Aliases : CDC23, APC8

Description : component *(APC8) of (APC/C)-dependent ubiquitination arc lamp subcomplex & original description: none


Gene families : OG0005671 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005671_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g18743
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Gb_03388 CDC23, APC8 component APC8 of (APC/C)-dependent ubiquitination arc... 0.02 OrthoFinder output from all 47 species
LOC_Os02g43920.1 CDC23, APC8,... component APC8 of (APC/C)-dependent ubiquitination arc... 0.02 OrthoFinder output from all 47 species
Solyc03g113740.4.1 CDC23, APC8,... component APC8 of (APC/C)-dependent ubiquitination arc... 0.03 OrthoFinder output from all 47 species
Zm00001e015323_P003 CDC23, APC8,... component APC8 of (APC/C)-dependent ubiquitination arc... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007192 APC8 9 152
IPR019734 TPR_repeat 393 424
No external refs found!