LOC_Os11g09990.1

Description : transcription factor (mTERF)

Gene families : OG_01_0000097 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000097_tree ,
OG_02_0000048 (LandPlants) Phylogenetic Tree(s): OG_02_0000048_tree ,
OG_03_0000021 (SeedPlants) Phylogenetic Tree(s): OG_03_0000021_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os11g09990.1
Cluster	HCCA: Cluster_291

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00225110	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.02	Archaeplastida
AMTR_s00060p00059830	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	Archaeplastida
GSVIVT01017772001	No alias	RNA biosynthesis.organelle...	0.03	Archaeplastida
GSVIVT01028380001	No alias	RNA biosynthesis.organelle...	0.04	Archaeplastida
Gb_00751	No alias	transcription factor (mTERF)	0.02	Archaeplastida
Gb_26176	No alias	transcription factor (mTERF)	0.03	Archaeplastida
MA_31885g0010	No alias	transcription factor (mTERF)	0.02	Archaeplastida
MA_57842g0010	No alias	transcription factor (mTERF)	0.03	Archaeplastida
Solyc04g011700.2.1	No alias	transcription factor (mTERF)	0.03	Archaeplastida
Zm00001e018894_P001	No alias	transcription factor (mTERF)	0.06	Archaeplastida
Zm00001e031638_P001	No alias	transcription factor (mTERF)	0.06	Archaeplastida
AMTR_s00010p00225110	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.02	LandPlants
AMTR_s00060p00059830	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	LandPlants
GSVIVT01017772001	No alias	RNA biosynthesis.organelle...	0.02	LandPlants
GSVIVT01028380001	No alias	RNA biosynthesis.organelle...	0.02	LandPlants
Gb_00751	No alias	transcription factor (mTERF)	0.02	LandPlants
Gb_12979	No alias	transcription factor (mTERF)	0.02	LandPlants
Gb_12989	No alias	transcription factor (mTERF)	0.02	LandPlants
Gb_14091	No alias	transcription factor (mTERF)	0.02	LandPlants
Gb_24665	No alias	transcription factor (mTERF)	0.02	LandPlants
Gb_26176	No alias	transcription factor (mTERF)	0.03	LandPlants
MA_31885g0010	No alias	transcription factor (mTERF)	0.02	LandPlants
MA_33244g0010	No alias	transcription factor (mTERF)	0.02	LandPlants
MA_57842g0010	No alias	transcription factor (mTERF)	0.02	LandPlants
MA_86824g0010	No alias	transcription factor (mTERF)	0.02	LandPlants
Solyc04g011700.2.1	No alias	transcription factor (mTERF)	0.03	LandPlants
Zm00001e018894_P001	No alias	transcription factor (mTERF)	0.06	LandPlants
Zm00001e031638_P001	No alias	transcription factor (mTERF)	0.06	LandPlants
AMTR_s00060p00059830	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	SeedPlants
GSVIVT01017772001	No alias	RNA biosynthesis.organelle...	0.02	SeedPlants
GSVIVT01028380001	No alias	RNA biosynthesis.organelle...	0.02	SeedPlants
Gb_12969	No alias	transcription factor (mTERF)	0.02	SeedPlants
Gb_12989	No alias	transcription factor (mTERF)	0.02	SeedPlants
Gb_24665	No alias	transcription factor (mTERF)	0.02	SeedPlants
MA_33244g0010	No alias	transcription factor (mTERF)	0.02	SeedPlants
MA_57842g0010	No alias	transcription factor (mTERF)	0.02	SeedPlants
MA_86824g0010	No alias	transcription factor (mTERF)	0.02	SeedPlants
MA_92135g0010	No alias	transcription factor (mTERF)	0.02	SeedPlants
Solyc04g011700.2.1	No alias	transcription factor (mTERF)	0.02	SeedPlants
Zm00001e018894_P001	No alias	transcription factor (mTERF)	0.06	SeedPlants
Zm00001e031638_P001	No alias	transcription factor (mTERF)	0.06	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003690	MTERF	96	358

External Links

No external refs found!

LOC_Os11g09990.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation