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  5. Ppi_g18496

Ppi_g18496


Description : not classified & original description: none


Gene families : OG0001265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g18496
Cluster HCCA: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
Adi_g025859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0214.g058333 No alias not classified & original description: CDS=705-1877 0.04 OrthoFinder output from all 47 species
Ceric.39G011900.1 Ceric.39G011900 not classified & original description: pacid=50583491... 0.04 OrthoFinder output from all 47 species
Pnu_g06251 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27184 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc02g090910.3.1 Solyc02g090910 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e018673_P002 Zm00001e018673 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 105 165
IPR000504 RRM_dom 509 567
IPR000504 RRM_dom 16 74
No external refs found!