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  5. Ppi_g18325

Ppi_g18325 (PAD2)


Aliases : PAD2

Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none


Gene families : OG0004574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004574_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g18325
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT3G51260 PAD1 20S proteasome alpha subunit PAD1 0.03 OrthoFinder output from all 47 species
Aop_g05904 PAD2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020830.84 PAD2 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
Cre01.g030850 PAD1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
GSVIVT01018748001 PAD2 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
LOC_Os09g36710.1 PAD2, LOC_Os09g36710 component alpha type-4 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Mp6g07820.1 PAD2 component alpha type-4 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Pp3c19_23260V3.1 PAD1, Pp3c19_23260 20S proteasome alpha subunit PAD1 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017430 PAD1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 4 26
IPR001353 Proteasome_sua/b 27 210
No external refs found!