Zm00001d028117 (GRMZM2G013457, GRMZM5G863656)


Aliases : GRMZM2G013457, GRMZM5G863656

Description : 29.2.1.2.1.53 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3A Ribosomal protein S3Ae


Gene families : OG_01_0002240 (Gene family) Phylogenetic Tree(s): OG0002240_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d028117
Cluster HCCA cluster: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT3G04840 No alias Ribosomal protein S3Ae 0.1 Gene family
AT4G34670 No alias Ribosomal protein S3Ae 0.11 Gene family
Cpa|evm.model.tig00020710.39 No alias 29.2.1.2.1.53 protein.synthesis.ribosomal... 0.12 Gene family
Cre13.g568650 No alias 29.2.1.2.1.53 protein.synthesis.ribosomal... 0.07 Gene family
GSVIVT01018024001 No alias 29.2.1.2.1.53 protein.synthesis.ribosomal... 0.03 Gene family
LOC_Os03g10340 Os03g0200500 29.2.1.2.1.53 protein.synthesis.ribosomal... 0.09 Gene family
LOC_Os12g21798 Os12g0406200 29.2.1.2.1.53 protein.synthesis.ribosomal... 0.11 Gene family
Smo160008 PACid_15417998 No description available 0.02 Gene family
Smo271906 PACid_15404512 No description available 0.05 Gene family
Smo271907 PACid_15404514 No description available 0.04 Gene family
Solyc03g097900.3.1 Solyc03g097900.3 29.2.1.2.1.53 protein.synthesis.ribosomal... 0.1 Gene family
Solyc06g072490.3.1 Solyc06g072490.3 29.2.1.2.1.53 protein.synthesis.ribosomal... 0.1 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan
CC GO:0005840 ribosome IEA InterProScan
BP GO:0006412 translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001593 Ribosomal_S3Ae 15 221
No external refs found!