Ppi_g18107 (CHA19, CHR19, ETL1)

Aliases : CHA19, CHR19, ETL1

Description : ATPase component *(Etl1) & original description: none

Gene families : OG0005169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005169_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g18107

Target	Alias	Description	ECC score	Gene Family Method
Ceric.32G067600.1	CHA19, CHR19,...	ATPase component *(Etl1) & original description:...	0.02	OrthoFinder output from all 47 species
Cre02.g087600	CHA19, CHR19, ETL1	Protein CHROMATIN REMODELING 19 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Len_g03887	CHA19, CHR19, ETL1	ATPase component *(Etl1) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g14259	CHA19, CHR19, ETL1	ATPase component *(Etl1) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEA	Interproscan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	657	769
IPR000330	SNF2_N	286	587

External Links

No external refs found!