Ppi_g17969 (CRM3, HCF152)


Aliases : CRM3, HCF152

Description : not classified & original description: none


Gene families : OG0001104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g17969

Target Alias Description ECC score Gene Family Method Actions
Aev_g06759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13606 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70936.t1 Aspi01Gene70936 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G061400.1 Ceric.01G061400 not classified & original description: pacid=50592672... 0.03 OrthoFinder output from all 47 species
Ceric.03G036200.1 Ceric.03G036200 not classified & original description: pacid=50571952... 0.03 OrthoFinder output from all 47 species
Ceric.19G017900.1 Ceric.19G017900 not classified & original description: pacid=50576444... 0.02 OrthoFinder output from all 47 species
Ceric.26G072600.1 EMB2750, Ceric.26G072600 not classified & original description: pacid=50599096... 0.03 OrthoFinder output from all 47 species
Dcu_g06427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02893 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019040001 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species
Gb_11322 No alias Pentatricopeptide repeat-containing protein At2g01390... 0.03 OrthoFinder output from all 47 species
Lfl_g05606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13668 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016802_P001 Zm00001e016802 Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 618 670
IPR002885 Pentatricopeptide_repeat 178 208
IPR002885 Pentatricopeptide_repeat 319 345
IPR002885 Pentatricopeptide_repeat 523 567
No external refs found!