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  5. Ppi_g17839

Ppi_g17839 (SMC5)


Aliases : SMC5

Description : component *(SMC5) of homologous recombination repair Smc5-Smc6 complex & original description: none


Gene families : OG0004405 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004405_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g17839

Target Alias Description ECC score Gene Family Method Actions
Adi_g012781 SMC5 component *(SMC5) of homologous recombination repair... 0.04 OrthoFinder output from all 47 species
Ala_g09526 SMC5 component *(SMC5) of homologous recombination repair... 0.03 OrthoFinder output from all 47 species
MA_10432022g0010 SMC5 Structural maintenance of chromosomes protein 5... 0.03 OrthoFinder output from all 47 species
Mp3g00700.1 SMC5 component SMC5 of homologous recombination repair... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009290 SMC5 component *(SMC5) of homologous recombination repair... 0.03 OrthoFinder output from all 47 species
Zm00001e013059_P001 SMC5, Zm00001e013059 component SMC5 of homologous recombination repair... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004860 protein kinase inhibitor activity IEP HCCA
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019210 kinase inhibitor activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003395 RecF/RecN/SMC_N 41 1008
No external refs found!