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  5. Ppi_g17434

Ppi_g17434


Description : not classified & original description: none


Gene families : OG0001661 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001661_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g17434
Cluster HCCA: Cluster_298

Target Alias Description ECC score Gene Family Method Actions
AT2G33490 No alias hydroxyproline-rich glycoprotein family protein 0.02 OrthoFinder output from all 47 species
Adi_g081483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g116527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g25694 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.38G016000.1 Ceric.38G016000 not classified & original description: pacid=50579436... 0.03 OrthoFinder output from all 47 species
Dcu_g03082 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01000947001 No alias Uncharacterized protein At2g33490 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Lfl_g03197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g15070.1 No alias Uncharacterized protein At2g33490 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pnu_g10118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo443693 No alias Uncharacterized protein At2g33490 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Tin_g04100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
MF GO:2001070 starch binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!