AMTR_s00004p00218000 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.213

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase-activating protein (RAB-GAP)


Gene families : OG_01_0001337 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001337_tree ,
OG_02_0002057 (LandPlants) Phylogenetic Tree(s): OG_02_0002057_tree ,
OG_03_0001737 (SeedPlants) Phylogenetic Tree(s): OG_03_0001737_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00218000
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AT5G54780 No alias Ypt/Rab-GAP domain of gyp1p superfamily protein 0.06 Archaeplastida
LOC_Os07g34130.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.03 Archaeplastida
LOC_Os11g37690.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.03 Archaeplastida
Solyc07g064230.4.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.05 Archaeplastida
Solyc10g006440.3.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.1 Archaeplastida
Zm00001e006461_P001 No alias RAB-GTPase-activating protein (RAB-GAP) 0.03 Archaeplastida
Zm00001e010495_P001 No alias RAB-GTPase-activating protein (RAB-GAP) 0.05 Archaeplastida
Zm00001e035132_P001 No alias RAB-GTPase-activating protein (RAB-GAP) 0.05 Archaeplastida
AT5G54780 No alias Ypt/Rab-GAP domain of gyp1p superfamily protein 0.06 LandPlants
LOC_Os07g34130.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.03 LandPlants
LOC_Os11g37690.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.03 LandPlants
Solyc07g064230.4.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.05 LandPlants
Solyc10g006440.3.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.1 LandPlants
Zm00001e006461_P001 No alias RAB-GTPase-activating protein (RAB-GAP) 0.02 LandPlants
Zm00001e010495_P001 No alias RAB-GTPase-activating protein (RAB-GAP) 0.05 LandPlants
Zm00001e035132_P001 No alias RAB-GTPase-activating protein (RAB-GAP) 0.05 LandPlants
AT5G54780 No alias Ypt/Rab-GAP domain of gyp1p superfamily protein 0.06 SeedPlants
LOC_Os07g34130.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.03 SeedPlants
LOC_Os11g37690.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.02 SeedPlants
Solyc07g064230.4.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.03 SeedPlants
Solyc10g006440.3.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.09 SeedPlants
Zm00001e006461_P001 No alias RAB-GTPase-activating protein (RAB-GAP) 0.02 SeedPlants
Zm00001e010495_P001 No alias RAB-GTPase-activating protein (RAB-GAP) 0.05 SeedPlants
Zm00001e035132_P001 No alias RAB-GTPase-activating protein (RAB-GAP) 0.05 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 198 354
No external refs found!