LOC_Os11g08080.1


Description : component BAF255/170 of chromatin remodeling complex


Gene families : OG_01_0000902 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000902_tree ,
OG_02_0007216 (LandPlants) Phylogenetic Tree(s): OG_02_0007216_tree ,
OG_03_0008401 (SeedPlants) Phylogenetic Tree(s): OG_03_0008401_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g08080.1
Cluster HCCA: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
AT1G21700 CHB4, SWI3C, ATSWI3C SWITCH/sucrose nonfermenting 3C 0.03 Archaeplastida
Cpa|evm.model.tig00000388.52 No alias Chromatin organisation.chromatin remodeling... 0.03 Archaeplastida
Cre08.g364050 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
GSVIVT01031951001 No alias Chromatin organisation.chromatin remodeling... 0.03 Archaeplastida
Mp8g15610.1 No alias component BAF255/170 of chromatin remodeling complex 0.02 Archaeplastida
Pp3c10_9060V3.1 No alias SWITCH/sucrose nonfermenting 3C 0.03 Archaeplastida
Pp3c25_660V3.1 No alias SWITCH/sucrose nonfermenting 3C 0.03 Archaeplastida
Pp3c2_24980V3.1 No alias switch subunit 3 0.03 Archaeplastida
Solyc01g109510.3.1 No alias component BAF255/170 of chromatin remodeling complex 0.03 Archaeplastida
Solyc06g060120.3.1 No alias component BAF255/170 of chromatin remodeling complex 0.03 Archaeplastida
AT1G21700 CHB4, SWI3C, ATSWI3C SWITCH/sucrose nonfermenting 3C 0.03 LandPlants
Pp3c10_9060V3.1 No alias SWITCH/sucrose nonfermenting 3C 0.02 LandPlants
Solyc06g060120.3.1 No alias component BAF255/170 of chromatin remodeling complex 0.03 LandPlants
AT1G21700 CHB4, SWI3C, ATSWI3C SWITCH/sucrose nonfermenting 3C 0.02 SeedPlants
Solyc06g060120.3.1 No alias component BAF255/170 of chromatin remodeling complex 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032451 SMARCC_C 592 667
IPR001005 SANT/Myb 417 458
IPR007526 SWIRM 188 275
No external refs found!