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  5. Ppi_g17245

Ppi_g17245 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0013109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g17245

Target Alias Description ECC score Gene Family Method Actions
Nbi_g42929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 455 481
IPR002885 Pentatricopeptide_repeat 253 278
IPR002885 Pentatricopeptide_repeat 383 412
IPR002885 Pentatricopeptide_repeat 483 508
IPR002885 Pentatricopeptide_repeat 177 224
IPR002885 Pentatricopeptide_repeat 77 123
IPR002885 Pentatricopeptide_repeat 280 326
No external refs found!