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  5. Ppi_g17226

Ppi_g17226


Description : not classified & original description: none


Gene families : OG0002178 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002178_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g17226
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AT3G57400 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT5G52500 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g021691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02464 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59583.t1 Aspi01Gene59583 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g01440.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g18583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47153 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA

No InterPro domains available for this sequence

No external refs found!