Ppi_g17020


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g17020

Target Alias Description ECC score Gene Family Method Actions
Aev_g24430 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18599 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0149.g053237 No alias E3 ubiquitin ligase & original description: CDS=1-2427 0.03 OrthoFinder output from all 47 species
Ceric.34G024200.1 Ceric.34G024200 E3 ubiquitin ligase & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g47007 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032672001 No alias U-box domain-containing protein 62 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Lfl_g19872 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
MA_109588g0010 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g08800.1 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp7g14730.1 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Ore_g12773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07885 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12559 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49248 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g009340.3.1 Solyc04g009340 U-box domain-containing protein 63 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g052220.3.1 Solyc05g052220 U-box domain-containing protein 62 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e006141_P004 Zm00001e006141 U-box domain-containing protein 62 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!