Description : E3 ubiquitin ligase *(SAUL) & original description: none
Gene families : OG0001077 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001077_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g16850 | |
Cluster | HCCA: Cluster_22 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00006p00256300 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00044p00145170 | PUB44, SAUL1,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g10635 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g11521 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.03G046500.1 | PUB44, SAUL1,... | E3 ubiquitin ligase *(SAUL) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g10711 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g03175 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g06205 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01001115001 | PUB8, B80 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g45420.1 | PUB44, SAUL1,... | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g16410.1 | LOC_Os06g16410 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os12g17880.1 | PUB44, SAUL1,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g13315 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo80532 | PUB44, SAUL1, ATPUB44 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g082570.3.1 | PUB44, SAUL1,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
Tin_g30532 | PUB44, SAUL1, ATPUB44 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e023438_P004 | Zm00001e023438 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e023512_P001 | PUB44, SAUL1,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0003006 | developmental process involved in reproduction | IEP | HCCA |
MF | GO:0005215 | transporter activity | IEP | HCCA |
MF | GO:0005384 | manganese ion transmembrane transporter activity | IEP | HCCA |
CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006813 | potassium ion transport | IEP | HCCA |
BP | GO:0006873 | cellular monoatomic ion homeostasis | IEP | HCCA |
BP | GO:0006875 | cellular metal ion homeostasis | IEP | HCCA |
BP | GO:0007275 | multicellular organism development | IEP | HCCA |
MF | GO:0008146 | sulfotransferase activity | IEP | HCCA |
MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0009790 | embryo development | IEP | HCCA |
BP | GO:0009793 | embryo development ending in seed dormancy | IEP | HCCA |
MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | HCCA |
BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
CC | GO:0019867 | outer membrane | IEP | HCCA |
BP | GO:0022414 | reproductive process | IEP | HCCA |
MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0030001 | metal ion transport | IEP | HCCA |
BP | GO:0030003 | cellular monoatomic cation homeostasis | IEP | HCCA |
BP | GO:0030026 | cellular manganese ion homeostasis | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
BP | GO:0032501 | multicellular organismal process | IEP | HCCA |
BP | GO:0032502 | developmental process | IEP | HCCA |
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | HCCA |
BP | GO:0042592 | homeostatic process | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | HCCA |
BP | GO:0048856 | anatomical structure development | IEP | HCCA |
BP | GO:0048878 | chemical homeostasis | IEP | HCCA |
BP | GO:0050801 | monoatomic ion homeostasis | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0055065 | metal ion homeostasis | IEP | HCCA |
BP | GO:0055071 | manganese ion homeostasis | IEP | HCCA |
BP | GO:0055076 | transition metal ion homeostasis | IEP | HCCA |
BP | GO:0055080 | monoatomic cation homeostasis | IEP | HCCA |
BP | GO:0055082 | cellular chemical homeostasis | IEP | HCCA |
BP | GO:0055085 | transmembrane transport | IEP | HCCA |
BP | GO:0071805 | potassium ion transmembrane transport | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
BP | GO:0098771 | inorganic ion homeostasis | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003613 | Ubox_domain | 65 | 138 |
No external refs found! |