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  5. Aev_g09626

Aev_g09626


Description : not classified & original description: none


Gene families : OG0000677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000677_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g09626
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00175460 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Als_g07409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g00874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g08570.1 LOC_Os10g08570 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9777167g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g37255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g062180.2.1 Solyc10g062180 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g02645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 282 349
No external refs found!