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  5. Ppi_g16576

Ppi_g16576 (DCP5)


Aliases : DCP5

Description : not classified & original description: none


Gene families : OG0001620 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001620_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g16576
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
MA_940261g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g01670 DCP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13523 DCP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16898 DCP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007896 DCP5 not classified & original description: CDS=166-1788 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR025609 Lsm14-like_N 13 85
IPR019050 FDF_dom 429 534
No external refs found!