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  5. Ppi_g16538

Ppi_g16538 (NPQ4, PSBS)


Aliases : NPQ4, PSBS

Description : not classified & original description: none


Gene families : OG0002938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002938_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g16538
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Als_g55405 NPQ4, PSBS not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15210 NPQ4, PSBS not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15673 NPQ4, PSBS not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21918 NPQ4, PSBS not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g78984 NPQ4, PSBS not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g06083 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
LOC_Os01g64960.1 NPQ4, PSBS,... non-photochemical quenching PsbS protein 0.03 OrthoFinder output from all 47 species
Pnu_g32714 NPQ4, PSBS not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g02820 NPQ4, PSBS not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g17059 NPQ4, PSBS not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17060 NPQ4, PSBS not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25149 NPQ4, PSBS not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g11981 No alias non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 179 247
No external refs found!