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  5. Ppi_g16492

Ppi_g16492 (OTP84)


Aliases : OTP84

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g16492

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00232800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00232590 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00170p00032020 OTP86,... Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
AT3G11460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g18046 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g34817 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30790 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g05294 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16770 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23950 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001624 No alias not classified & original description: CDS=110-1882 0.05 OrthoFinder output from all 47 species
Ceric.03G008600.1 Ceric.03G008600 not classified & original description: pacid=50571724... 0.04 OrthoFinder output from all 47 species
Ceric.22G009800.1 Ceric.22G009800 not classified & original description: pacid=50615356... 0.04 OrthoFinder output from all 47 species
Ceric.26G058400.1 VAC1, ECB2,... not classified & original description: pacid=50598871... 0.04 OrthoFinder output from all 47 species
Ceric.29G070600.1 Ceric.29G070600 not classified & original description: pacid=50625806... 0.03 OrthoFinder output from all 47 species
Ceric.39G011500.1 Ceric.39G011500 not classified & original description: pacid=50582697... 0.03 OrthoFinder output from all 47 species
Dac_g30123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g28005 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06009 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17807 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g44170.1 EMB2758, LOC_Os07g44170 Pentatricopeptide repeat-containing protein At4g33990... 0.04 OrthoFinder output from all 47 species
LOC_Os11g01836.1 LOC_Os11g01836 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Lfl_g18893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04440 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03100 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22252 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo76916 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Smo79732 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Tin_g17887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25647 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29210 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023800_P003 PDE247, CLB19,... RNA editing factor (CLB19) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 280 327
IPR002885 Pentatricopeptide_repeat 179 225
IPR002885 Pentatricopeptide_repeat 255 276
IPR002885 Pentatricopeptide_repeat 78 107
IPR002885 Pentatricopeptide_repeat 50 71
No external refs found!