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  5. Ppi_g16478

Ppi_g16478


Description : GRAS-type transcription factor & original description: none


Gene families : OG0000181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g16478

Target Alias Description ECC score Gene Family Method Actions
Adi_g115872 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14111 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16795 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37656.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37657.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G055000.1 Ceric.20G055000 GRAS-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g24896 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45009 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04133 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09496 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29164 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03966 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g13206 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g20490.1 ATGRAS2, SCL14, GRAS2 transcription factor (GRAS) 0.01 OrthoFinder output from all 47 species
Nbi_g21507 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65564 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05662 No alias GRAS-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g07285 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0156.g023668 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: CDS=1-2256 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0156.g023672 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: CDS=1-1506 0.02 OrthoFinder output from all 47 species
Sam_g03971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41396 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51476 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006195_P001 ATGRAS2, SCL14,... transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Zm00001e020943_P001 Zm00001e020943 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Zm00001e020944_P001 ATGRAS2, SCL14,... transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0008535 respiratory chain complex IV assembly IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 362 736
No external refs found!