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  5. Ppi_g16287

Ppi_g16287


Description : not classified & original description: none


Gene families : OG0001797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g16287
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00088750 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00021p00245460 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G28080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g077986 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15019 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g46749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29315 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g08477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56297.t1 Aspi01Gene56297 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72080.t1 Aspi01Gene72080 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16051 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g37897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23136 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04071 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g19382 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01023694001 No alias Protein TSS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os04g55230.1 LOC_Os04g55230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
LOC_Os07g23990.1 LOC_Os07g23990 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
Len_g08747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436966g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 111.0) 0.02 OrthoFinder output from all 47 species
Msp_g31543 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27550 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g25092 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g14901 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g15877 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g56916 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g07071 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g09729 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19748 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g19896 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g33780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0232.g026478 No alias not classified & original description: CDS=1336-7002 0.03 OrthoFinder output from all 47 species
Sam_g03731 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08962 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Smo442478 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Solyc07g006030.4.1 Solyc07g006030 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.05 OrthoFinder output from all 47 species
Spa_g15741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50937 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56345 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e041774_P003 Zm00001e041774 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR033646 CLU-central 774 911
IPR028275 CLU_N 48 118
No external refs found!