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  5. Ppi_g16061

Ppi_g16061 (ATSYP41, ATTLG2A, SYP41)


Aliases : ATSYP41, ATTLG2A, SYP41

Description : Qa-type SYP4-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0004092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g16061

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00109670 SYP43, ATSYP43,... Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Cre12.g507450 ATSYP41, ATTLG2A, SYP41 Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008198 ferrous iron binding IEP HCCA
CC GO:0071821 FANCM-MHF complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 265 317
No external refs found!