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  5. Ppi_g15549

Ppi_g15549 (ATRGP1, RGP1)


Aliases : ATRGP1, RGP1

Description : UDP-L-arabinose mutase & original description: none


Gene families : OG0001238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001238_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g15549
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00209120 ATRGP1, RGP1,... Carbohydrate metabolism.nucleotide sugar... 0.03 OrthoFinder output from all 47 species
AT3G02230 ATRGP1, RGP1 reversibly glycosylated polypeptide 1 0.04 OrthoFinder output from all 47 species
AT5G15650 RGP2, ATRGP2 reversibly glycosylated polypeptide 2 0.03 OrthoFinder output from all 47 species
AT5G16510 No alias Alpha-1,4-glucan-protein synthase family protein 0.03 OrthoFinder output from all 47 species
Adi_g003302 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06621 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g12669 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12775 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38503 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02782 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04276 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g01842 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G101600.1 ATRGP1, RGP1,... UDP-L-arabinose mutase & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g07553 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01036557001 RGP3, RGP Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
LOC_Os03g40270.1 RGP2, ATRGP2,... UDP-L-arabinose mutase 0.05 OrthoFinder output from all 47 species
LOC_Os07g41360.1 ATRGP1, RGP1,... UDP-L-arabinose mutase 0.03 OrthoFinder output from all 47 species
Lfl_g34861 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
MA_18309g0010 No alias UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
Mp2g10800.1 ATRGP1, RGP1 UDP-L-arabinose mutase 0.04 OrthoFinder output from all 47 species
Msp_g01532 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012500 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: CDS=168-1190 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013218 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: CDS=186-1241 0.04 OrthoFinder output from all 47 species
Sam_g16092 No alias UDP-L-arabinose mutase & original description: none 0.04 OrthoFinder output from all 47 species
Smo140071 ATRGP1, RGP1 Carbohydrate metabolism.nucleotide sugar... 0.04 OrthoFinder output from all 47 species
Solyc02g089170.4.1 ATRGP1, RGP1,... UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
Solyc03g070390.3.1 ATRGP1, RGP1,... UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
Solyc04g005340.2.1 ATRGP1, RGP1,... UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
Solyc04g051200.2.1 Solyc04g051200 UDP-L-arabinose mutase 0.04 OrthoFinder output from all 47 species
Spa_g17383 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55000 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40978 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e006668_P001 Zm00001e006668 UDP-L-arabinose mutase 0.06 OrthoFinder output from all 47 species
Zm00001e012459_P003 RGP2, ATRGP2,... UDP-L-arabinose mutase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR037595 RGP_fam 4 337
No external refs found!