- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : component *(SOP1) of PAXT RNA-exosome-activation complex & original description: none
Gene families : OG0004256 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004256_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g086844 | No alias | component *(SOP1) of PAXT RNA-exosome-activation complex... | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g33279 | No alias | component *(SOP1) of PAXT RNA-exosome-activation complex... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g26394 | No alias | component *(SOP1) of PAXT RNA-exosome-activation complex... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g14012 | No alias | component *(SOP1) of PAXT RNA-exosome-activation complex... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0010.g012372 | No alias | component *(SOP1) of PAXT RNA-exosome-activation complex... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07788 | No alias | component *(SOP1) of PAXT RNA-exosome-activation complex... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.23G086900.1 | Ceric.23G086900 | component *(SOP1) of PAXT RNA-exosome-activation complex... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01008802001 | No alias | RNA processing.RNA decay.exosome complex.associated... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g43120.1 | LOC_Os06g43120 | RNA degradation surveillance factor (SOP1) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g41224 | No alias | component *(SOP1) of PAXT RNA-exosome-activation complex... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g16590 | No alias | component *(SOP1) of PAXT RNA-exosome-activation complex... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g23885 | No alias | component *(SOP1) of PAXT RNA-exosome-activation complex... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g12684 | No alias | component *(SOP1) of PAXT RNA-exosome-activation complex... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g44276 | No alias | component *(SOP1) of PAXT RNA-exosome-activation complex... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g15166 | No alias | component *(SOP1) of PAXT RNA-exosome-activation complex... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc04g057990.4.1 | Solyc04g057990 | RNA degradation surveillance factor (SOP1) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g22203 | No alias | component *(SOP1) of PAXT RNA-exosome-activation complex... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g16673 | No alias | component *(SOP1) of PAXT RNA-exosome-activation complex... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e037509_P004 | Zm00001e037509 | RNA degradation surveillance factor (SOP1) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003883 | CTP synthase activity | IEP | HCCA |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| BP | GO:0006479 | protein methylation | IEP | HCCA |
| BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| BP | GO:0008213 | protein alkylation | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016571 | histone methylation | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051170 | import into nucleus | IEP | HCCA |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |