LOC_Os11g05690.2


Description : cationic amino acid transporter (CAT)


Gene families : OG_01_0000547 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000547_tree ,
OG_02_0002054 (LandPlants) Phylogenetic Tree(s): OG_02_0002054_tree ,
OG_03_0001934 (SeedPlants) Phylogenetic Tree(s): OG_03_0001934_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g05690.2
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00166780 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.07 Archaeplastida
GSVIVT01021609001 No alias Solute transport.carrier-mediated transport.APC... 0.04 Archaeplastida
LOC_Os01g11160.1 No alias cationic amino acid transporter (CAT) 0.02 Archaeplastida
MA_10433254g0010 No alias Cationic amino acid transporter 1 OS=Arabidopsis... 0.04 Archaeplastida
MA_108090g0010 No alias cationic amino acid transporter (CAT) 0.02 Archaeplastida
Solyc11g006710.2.1 No alias cationic amino acid transporter (CAT) 0.04 Archaeplastida
Zm00001e016491_P001 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
Zm00001e024163_P002 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
Zm00001e030690_P001 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
Zm00001e039396_P004 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
MA_140351g0010 No alias Cationic amino acid transporter 7, chloroplastic... 0.01 LandPlants
Solyc08g077810.2.1 No alias Cationic amino acid transporter 6, chloroplastic... 0.02 LandPlants
Solyc11g006710.2.1 No alias cationic amino acid transporter (CAT) 0.04 LandPlants
Zm00001e039396_P004 No alias cationic amino acid transporter (CAT) 0.03 LandPlants
MA_140351g0010 No alias Cationic amino acid transporter 7, chloroplastic... 0.01 SeedPlants
Solyc11g006710.2.1 No alias cationic amino acid transporter (CAT) 0.04 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR029485 CAT_C 530 580
IPR002293 AA/rel_permease1 75 500
No external refs found!