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  5. Ppi_g15192

Ppi_g15192 (RIF10, PNP)


Aliases : RIF10, PNP

Description : EC_2.7 transferase transferring phosphorus-containing group & original description: none


Gene families : OG0002534 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002534_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g15192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00095690 RIF10, PNP,... RNA processing.organelle machineries.ribonuclease... 0.04 OrthoFinder output from all 47 species
AT3G03710 RIF10, PNP polyribonucleotide nucleotidyltransferase, putative 0.04 OrthoFinder output from all 47 species
Adi_g021889 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.09 OrthoFinder output from all 47 species
Ala_g20124 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Als_g32229 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Aop_g10994 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Dcu_g47719 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Dde_g30979 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Ehy_g15453 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
GSVIVT01029958001 RIF10, PNP RNA processing.organelle machineries.ribonuclease... 0.03 OrthoFinder output from all 47 species
LOC_Os07g07310.1 RIF10, PNP,... polynucleotide phosphorylase (PNP) 0.02 OrthoFinder output from all 47 species
Len_g23960 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Lfl_g17615 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.08 OrthoFinder output from all 47 species
Mp4g17520.1 RIF10, PNP polynucleotide phosphorylase (PNP) 0.05 OrthoFinder output from all 47 species
Nbi_g09693 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ore_g20554 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.09 OrthoFinder output from all 47 species
Ore_g23287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13596 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Sam_g15795 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Smo77425 RIF10, PNP RNA processing.organelle machineries.ribonuclease... 0.02 OrthoFinder output from all 47 species
Solyc08g066120.4.1 RIF10, PNP,... polynucleotide phosphorylase (PNP) 0.03 OrthoFinder output from all 47 species
Spa_g04595 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Zm00001e032889_P001 RIF10, PNP,... polynucleotide phosphorylase (PNP) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 767 831
IPR015847 ExoRNase_PH_dom2 238 299
IPR001247 ExoRNase_PH_dom1 456 589
IPR001247 ExoRNase_PH_dom1 103 233
IPR004088 KH_dom_type_1 695 752
No external refs found!