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Aliases : PAT1
Description : GRAS-type transcription factor & original description: none
Gene families : OG0000550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000550_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ppi_g15172 | |
| Cluster | HCCA: Cluster_136 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G48150 | PAT1 | GRAS family transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g03969 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06251 | PAT1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004061 | arylformamidase activity | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006568 | tryptophan metabolic process | IEP | HCCA |
| BP | GO:0006569 | tryptophan catabolic process | IEP | HCCA |
| BP | GO:0006576 | biogenic amine metabolic process | IEP | HCCA |
| BP | GO:0006586 | indolalkylamine metabolic process | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| BP | GO:0009063 | amino acid catabolic process | IEP | HCCA |
| BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
| BP | GO:0009074 | aromatic amino acid family catabolic process | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
| BP | GO:0016054 | organic acid catabolic process | IEP | HCCA |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0019441 | tryptophan catabolic process to kynurenine | IEP | HCCA |
| BP | GO:0042180 | cellular ketone metabolic process | IEP | HCCA |
| BP | GO:0042430 | indole-containing compound metabolic process | IEP | HCCA |
| BP | GO:0042436 | indole-containing compound catabolic process | IEP | HCCA |
| BP | GO:0042537 | benzene-containing compound metabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0070189 | kynurenine metabolic process | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901606 | alpha-amino acid catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005202 | TF_GRAS | 327 | 693 |
| No external refs found! |