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  5. Ppi_g14558

Ppi_g14558


Description : not classified & original description: none


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g14558

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00256680 evm_27.TU.AmTr_v1... PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00120950 evm_27.TU.AmTr_v1... PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
AT1G69710 No alias Regulator of chromosome condensation (RCC1) family with... 0.02 OrthoFinder output from all 47 species
AT5G19420 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 OrthoFinder output from all 47 species
AT5G42140 No alias Regulator of chromosome condensation (RCC1) family with... 0.02 OrthoFinder output from all 47 species
Adi_g014208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0167.g054488 No alias not classified & original description: CDS=1991-5185 0.03 OrthoFinder output from all 47 species
Cre16.g691050 PRAF1 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Dac_g09907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001675001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
LOC_Os01g72320.1 LOC_Os01g72320 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os05g01610.1 PRAF1, LOC_Os05g01610 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Len_g14356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430532g0010 PRAF1 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Mp1g24610.1 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Pir_g18195 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006893 No alias not classified & original description: CDS=1775-4951 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022141 No alias not classified & original description: CDS=662-3931 0.02 OrthoFinder output from all 47 species
Sam_g30101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo112120 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Tin_g04728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028276_P001 Zm00001e028276 PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
Zm00001e028312_P001 Zm00001e028312 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR027988 BRX_N 905 935
IPR000306 Znf_FYVE 655 721
IPR013591 Brevis_radix_dom 1040 1093
IPR000408 Reg_chr_condens 550 599
IPR000408 Reg_chr_condens 330 378
IPR000408 Reg_chr_condens 434 483
IPR000408 Reg_chr_condens 381 430
IPR000408 Reg_chr_condens 498 547
IPR000408 Reg_chr_condens 604 651
No external refs found!