Ppi_g13965

Description : not classified & original description: none

Gene families : OG0029927 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0029927_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g13965
Cluster	HCCA: Cluster_148

Target	Alias	Description	ECC score	Gene Family Method
Aop_g28313	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g16097	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g61333	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016160	amylase activity	IEP	HCCA
MF	GO:0016161	beta-amylase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	304	351
IPR002885	Pentatricopeptide_repeat	202	248
IPR002885	Pentatricopeptide_repeat	100	147
IPR002885	Pentatricopeptide_repeat	276	301
IPR002885	Pentatricopeptide_repeat	8	30
IPR002885	Pentatricopeptide_repeat	177	199
IPR002885	Pentatricopeptide_repeat	72	95

External Links

No external refs found!