1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00086p00056140

AMTR_s00086p00056140 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00086.22

No description available


Gene families : OG_01_0001243 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001243_tree ,
OG_02_0000962 (LandPlants) Phylogenetic Tree(s): OG_02_0000962_tree ,
OG_03_0002114 (SeedPlants) Phylogenetic Tree(s): OG_03_0002114_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00086p00056140
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT4G33810 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
AT4G33860 No alias Glycosyl hydrolase family 10 protein 0.02 Archaeplastida
GSVIVT01024049001 No alias No description available 0.03 Archaeplastida
GSVIVT01037825001 No alias No description available 0.04 Archaeplastida
GSVIVT01037832001 No alias No description available 0.04 Archaeplastida
GSVIVT01037833001 No alias No description available 0.05 Archaeplastida
LOC_Os03g14010.1 No alias no description available(sp|q84wt5|xyn5l_arath : 305.0) 0.03 Archaeplastida
LOC_Os10g21110.1 No alias no description available(sp|q680b7|xyn4_arath : 358.0) 0.02 Archaeplastida
Solyc01g106990.2.1 No alias no description available(sp|q84wt5|xyn5l_arath : 338.0) 0.03 Archaeplastida
Solyc01g107000.3.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc05g051260.3.1 No alias no description available(sp|q84wt5|xyn5l_arath : 344.0) 0.03 Archaeplastida
Solyc11g043160.2.1 No alias no description available(sp|q84wt5|xyn5l_arath : 375.0) 0.01 Archaeplastida
Zm00001e001013_P003 No alias no description available(sp|q84wt5|xyn5l_arath : 305.0) 0.02 Archaeplastida
GSVIVT01024049001 No alias No description available 0.03 LandPlants
GSVIVT01037825001 No alias No description available 0.03 LandPlants
GSVIVT01037832001 No alias No description available 0.03 LandPlants
GSVIVT01037833001 No alias No description available 0.04 LandPlants
LOC_Os03g14010.1 No alias no description available(sp|q84wt5|xyn5l_arath : 305.0) 0.03 LandPlants
LOC_Os10g21110.1 No alias no description available(sp|q680b7|xyn4_arath : 358.0) 0.02 LandPlants
Solyc01g107000.3.1 No alias no hits & (original description: none) 0.01 LandPlants
Solyc11g043160.2.1 No alias no description available(sp|q84wt5|xyn5l_arath : 375.0) 0.01 LandPlants
Zm00001e001013_P003 No alias no description available(sp|q84wt5|xyn5l_arath : 305.0) 0.02 LandPlants
AT4G33830 No alias Glycosyl hydrolase family 10 protein 0.02 SeedPlants
GSVIVT01037825001 No alias No description available 0.01 SeedPlants
GSVIVT01037832001 No alias No description available 0.02 SeedPlants
GSVIVT01037833001 No alias No description available 0.02 SeedPlants
Solyc11g043160.2.1 No alias no description available(sp|q84wt5|xyn5l_arath : 375.0) 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001000 GH10 152 411
No external refs found!